I let my 2011 S run until the fan shuts off too. In this 95-degree weather...soon to be 100 in Texas, it runs 5-10 minutes after you stop.
I'm not sure that you'd need to, given that the source of the heat (the electric power) is removed once you turn off the key. It's not like, say, a turbo, where you need to keep oil pressure to the bearings while it spins down. The fan control probably has some hysteresis built into it, maybe a bit too much, so it's not constantly turning off and on.
This is worrisome. To me, it means the fan really can't keep up. Compare that to an ICE with a radiator where the fan comes on for maybe 30 seconds before things cool off enough for the fan to turn off. Heat seems to be a problem with the 2012s too since you cannot maintain high speeds in hot weather for very long. This is why I think we will see a liquid cooling system in next year's model, especially if they tweak the motor for more speed/acceleration and increase battery size. At least they test their bikes in sunny California so they are aware of the effects of heat and sun.
My 2012 DS has no fan. I live in southeast Texas, and it was 92 today. I reached down and touched the motor after riding 20 miles or so, and it was a little warm, but nothing to worry about. The battery enclosure actually felt a little cool to the touch. I suppose the real test will occur in July, when it's in the upper 90s or so here, but I don't anticipate any problems.
I maintained 70 mph for two 20-mile stretches on an 85-degree day not too long ago for a range test, no problem. I think the heat is only an issue at WOT. There's one thread on here where a guy racing a 2012 S removed the lower fairing (which does nothing for cooling, something Zero might want to look into) and was evidently able to race without temperature problems afterward.
California? Well, unless they test in Death Valley, they probably aren't commonly going to see temperatures like we Texans get. It's sunny all right, but it seems to be pretty temperate there near the coast at least, from what I see on the TV weather.